Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902152.1_cds_XP_016452156.1_46424
CDS Infomation

[gene=LOC107776755] [db_xref=GeneID:107776755] [protein=ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like isoform X1] [protein_id=XP_016452156.1] [location=complement(join(15982..16815,16919..17020,18070..18546,20717..20841,20936..21181,21322..21585,22966..23053,23645..23671))] [gbkey=CDS]
Sequence

ATGGCTTTAATGCGCCTTCTCAGACAGGTTGAAAGGCAGCAATCTCAACTAAGGCAGCTA
AACTATTTTCTCAATAGAACCTATCTTACCTCTGGAAAGGCTATAGGAGGTGGAGTACAT
GGAGCTGCAAGAACCAAGGGAAGGTTTCGATCAAGTTATGTGGGCAGCCTAGCCCGTCGA
GTACGTGATACAGAAGAAGCTACTGATGCGGCGTATCTCAGAGAGCTATATCATAAGAAC
GATCCAGAGGCAGTCATAAGGTTGTTTGAAGGTCAACCTTCACTTCATTCTAATCCAGCA
GCACTCTCGGAGTATGTTAAGGCGCTGGTTAAGGTTGATAGACTAGATGAAAGTGAGCTG
CTCCGGACATTGCAGAGAGGGATTGGTGGTACTGCTAGCTCTCATGCGGAAGAAGCAAAT
TTAGGAGCTCTGTCAGCTTTTAGAAATGTTGGGAAAGCTATGAAGGATGGTGTGCTTGGT
ACTGCCAATGCTCCTATACATATGGTGGCTGTTGAAGGGGCTCATTTCAAAGAACAGTTG
TGGCGTACATTCCGTGCTCTTGGTTTGGCCTTTCTCTTGATTTCAGGTGTTGGTGCGCTC
ATTGAAGATAGAGGAATCAGCAAAGGACTTGGTCTAAATGAGGAAGTGCAGCCGACTATG
GAAACCAATACAAGATTTGCTGATGTGAAGGGTGTTGATGAGGCGAAAGGGGAGCTGGAA
GAGATTGTGCACTATCTTCGAGACCCTAAGCGATTCACTCGTCTTGGTGGCAAGCTCCCA
AAGGGCGTGTTACTTGTTGGTCCACCTGGAACTGGTAAGACCATGTTGGCAAGAGCCATA
GCAGGAGAAGCTGGGGTTCCCTTTTTCTCGTGCAGTGGCAGTGAATTTGAGGAAATGTTT
GTTGGTGTTGGAGCCCGGAGAGTAAGAGACCTTTTTGCAGCTGCTAAGAAACGATCACCG
TGCATTATATTCATTGATGAAATTGATGCCATTGGAGGTAGCCGTAACCCAAAGGACCAG
CAATATATGAGGATGACTTTGAATCAGTTGCTTGTTGAGCTGGATGGTTTCAAACAGAAC
GATGGAATCATTGTGATTGCTGCCACTAACTTTCCTGAGTCATTGGATAAGGCACTGGTG
AGACCTGGACGTTTTGATCGCAACATTGTTGTCCCAAATCCTGATGTTGAAGGTCGGAAG
CAGATTCTGGAATCTCACATGTCAAAGGTTGTTAAGGCCGATGATGCGGACCTTATGATC
ATTGCTAGAGGGACTCCTGGATTTTCTGGTGCTGACCTTGCCAATTTGGTTAACATTGCT
GCTGTGAAGGCTGCAATGGATGGTGCCAAAGCTGTAAGCTTGGCTGATCTAGAGTATGCT
AAGGACAAGATCATGATGGGAAGTGAGCGCAAATCAGCTTTCATATCCAAAGAGACGAAA
AAGCTTACCGCCTACCATGAAGGTGGCCATGCTCTTGTGGCTATTCATACTGATGGGGCT
CTTCCAGTTCACAAGGCAACCATTGTTCCACGTGGTATGGCTCTCGGTATGGTTGCTCAA
TTGCCTGAGAAGGATGAGACTAGTATGTCCCGTAAGCAGATGCTTGCTCGGCTTGATGTT
GCTATGGGTGGGCGAGTCGCTGAAGAGCTCATTTTCGGAGAAAGTGAAGTAACTTCTGGT
CCATCTAGCGATCTCCAGCAAGCAACCAATCTCGCCAGGGCCATGGTTACCAAGTGGGGC
ATGAGCAAAGAAGTTGGGCTCGTCACCCACAACTATGACGATAATGGGAAGAGTATGAGC
ACTGAAACGAGGCTTCTCATTGAGAAGGAAGTAAGAGAATTACTTGAAAGGGCTTACAAC
AATGCAAAAACGATTCTGACCACCCACAACAAAGAGCTTCATGCCCTTGCCAATGCATTA
CTTGAGCAGGAAACACTGACTGGAAACCAGATAAAGGCCCTGCTTACACAGGTCAATTCT
CAACATACACAACAGCAGCAACCTCAATTAGTGACTGAGGAGAGCACATCACCATCCAAT
CCAGCTCCTCCGTCAAGTCCAACTGCAGCAGCTGCTGCTGCGGCCGCTGCTGCAGCAGCC
GGCGCTGCAGCTGCGGCCACTGCCGCAGCCAAAACCAAAGGCATTGCTCCTGTAGGACCT
TAG

Peptide Sequence

PEP ID

XP_016452156.1
PEP Infomation

PREDICTED: ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like isoform X1 [Nicotiana tabacum]
Sequence

MALMRLLRQVERQQSQLRQLNYFLNRTYLTSGKAIGGGVHGAARTKGRFRSSYVGSLARR
VRDTEEATDAAYLRELYHKNDPEAVIRLFEGQPSLHSNPAALSEYVKALVKVDRLDESEL
LRTLQRGIGGTASSHAEEANLGALSAFRNVGKAMKDGVLGTANAPIHMVAVEGAHFKEQL
WRTFRALGLAFLLISGVGALIEDRGISKGLGLNEEVQPTMETNTRFADVKGVDEAKGELE
EIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMF
VGVGARRVRDLFAAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMRMTLNQLLVELDGFKQN
DGIIVIAATNFPESLDKALVRPGRFDRNIVVPNPDVEGRKQILESHMSKVVKADDADLMI
IARGTPGFSGADLANLVNIAAVKAAMDGAKAVSLADLEYAKDKIMMGSERKSAFISKETK
KLTAYHEGGHALVAIHTDGALPVHKATIVPRGMALGMVAQLPEKDETSMSRKQMLARLDV
AMGGRVAEELIFGESEVTSGPSSDLQQATNLARAMVTKWGMSKEVGLVTHNYDDNGKSMS
TETRLLIEKEVRELLERAYNNAKTILTTHNKELHALANALLEQETLTGNQIKALLTQVNS
QHTQQQQPQLVTEESTSPSNPAPPSSPTAAAAAAAAAAAAGAAAAATAAAKTKGIAPVGP

Transcript Sequence

Gene sequence data has not been registered.